Resources
Professor
Jabbari's research group occupies two laboratories covering a total of
approximately 1000 square feet in the Swearingen Engineering Center.
These laboratories are fully equipped for experimental chemical and
biological work (i.e., they include fume hoods, wet counters,
incubators, and cell culture laminar hoods). One laboratory is equipped
for polymer and peptide synthesis, biomaterials characterization, and
scaffold fabrication. The other laboratory is dedicated to cell
isolation, scaffold cell seeding, and tissue culture. The principle
investigator directs a laboratory group comprised of post doctoral
research associates, graduate students, residents of the Orthopedic
Surgery Department (School of Medicine), summer research trainees, and
undergraduate students.
Gel Permeation Chromatography |
High-Performance Liquid Chromatography
|
Advanced Rheometry |
Tissue Culture |
Major Equipment
Gel Pernmeation Chromatography:
A Waters 717 Plus Autosampler GPC system connected to a model 616 HPLC
pump, model 600S controller, model 996 photodiode array detector, and
model 410 refractive index detector for characterization of polymer
molecular weight distribution.
High Performance Liquid Chromatography:
second Waters 717 Plus Autosampler reverse phase HPLC system connected
to a model 616 HPLC pump, model 600S controller, and model 996
photodiode array detector for purification and identification of
peptides and proteins.
Advanced Rheometer:
and a state of the art TA instruments AR2000 rheometer equipped with
cone and parallel plate geometries for measurement of rheological
properties, gelation and network formation of biomaterials are
available in the PI’s laboratory.
Plate Reader:
A Bio-Tek Synergy HT fluorescence/ luminescence/ absorbance plate
reader with extended emission range for measurement of cell number and
viability, quantification of the extracellular matrix composition of
tissue engineered constructs, and measurement of the release kinetics
of proteins from mircospheres is also available in the PI’s laboratory.
Polymer and Peptide Synthesis:
A polymerization reaction system equipped with multiple heavy duty
three-neck flasks, flexible stirrer shaft, motor, shaft, blade, and
controller, flexible grip chuck and Teflon sleeves, vacuum manifold,
adapter, and gauge, Instratherm oil bath with temperature probe and
controller, and addition funnels is available in our own Biomaterials
laboratory. A Captair Pyramid Model 1370 glove bag for peptide
synthesis, two complete distillation systems, a Heidolph Laborota 4001
rotoevaporator, 1 mg Mettler Toledo AX204 balance, 10 mg Mettler Toledo
PG5002-S balance, programmable model WS-400B spin coater, VWR
scientific convection oven, Lab-Line Enveon incubator shaker, VWR
Scientific model 1430D vacuum oven connected to Edwards 12 vacuum pump,
VWR Scientific model 1305U conduction oven, three nitrogen tanks with
multistage regulators, Kenmore refrigerator/freezer, dessicators,
sieves, heating mantles, heating blocks, digital caliper, Calibrex
bottle-top dispensers, high intensity UVP B-100AP/R UV lamp for curing,
vortexers, mixers, heating/stirring plates, chemicals and supplies, and
glassware are available in our Biomaterials laboratory.
Tissue Culture:
A 6’ HERAsafe model KS18 tissue culture laminar hood, 2 HERAcell 150
tissue culture incubators with solid copper inner casing and 3-door gas
screen, an Eppendorf 5810 table-top centrifuge, Eppendorf 5415D
microcentrifuge, UNOVA 3000 waterbath shaker, Fisher Scientific ISOTEMP
220 waterbath, FREEZONE 4.5 Labconco freeze dryer system connected to a
Labconco 117 vacuum pump, AN74i Anprolene gas sterilizer, New Brunswick
U410 premium -80°C ultra low temperature freezer, Thermo Orion 290A pH
meter, Cole-Parmer CP 130PB-1 ultrasonic processor with probe,
Thermolyne heater/stirrer plate, Sharp Carousel microwave oven,
Frigidaire refrigerator/freezer, Ohous 10mg balance, Eppendorf 10, 100,
200, and 1000 ml pipettors, glassware, and tissue culture chemicals and
supplies are available in our tissue culture laboratory.
Computing:
4 PCs are available in the principal investigator’s laboratories for
data collection, storage, analysis, and word processing. Graduate
students and post doctoral researchers in the Department of Chemical
Engineering have access to multiple PC and UNIX labs for computing. A
32 Central Processing Unit (CPU) cluster, an 8 CPU symmetric
multiprocessing (SMP) SGI 64 bit Itanium machine and a 72 node Xeon
Blade machine with fiber channel interconnect are available in the
School of Engineering for data analysis, modeling, and simulation. The
Chemical Engineering computing facility has a server with an Athlon
XP-3200 CPU and 2.2 Terabyte hard-drive with dedicated space for PI and
provides weekly backup of all research files.
Additional Resources Available on USC Campus
Infrared and Raman Spectroscopy and Thermal and Particle Size Analysis:
The PI has access to a variety of specialized equipment within the
Department of Chemical Engineering for structural characterization of
biomaterials and tissue engineered scaffolds. These include a Rigaku
D-max-B X-ray diffractometer (XRD), Micromeritics ASAP 2010 pore size
distribution analyzer; Pulse ChemSorb 2700 surface area analyzer,
Nicolet 740 FTIR Spectrometer with attenuated total reflectance (ATR)
and diffuse reflectance (DRIFTS) sampling cells, confocal Raman
microscope with computer-controlled depth profiling and X-Y mapping
capability, atomic absorption analyzer, Perkin-Elmer DSC-7 differential
scanning calorimeter, Perkin-Elmer TGA-7 thermogravimetric analyzer,
Nicomp 370 and Accusizer 770A submicron and micron particle sizing
systems.
Scaffold Fabrication and Mechanical Testing:
The Center for manufacturing and Technology and the Reinforced Plastics
Research Laboratory are located in the Department of Mechanical
Engineering and house Material and Structure testing equipment
including tension-compression testing machines, impact tester, creep
and stress rupture tester, state-of-the-art finite element analysis
tools for computational stress/strain analysis, and a machine shop for
machining or modifying implant prototypes, internal fixation devices,
testing apparatuses, and molds for specimen preparation. A
state-of-the-art FDM 3000 Fused Deposition Modeler is also available in
the Advanced Manufacturing Center for fabrication of tissue engineered
scaffolds with well-defined geometry and pore architecture.
(http://www.me.sc.edu/Research/cmmnde/)
(http://www.me.sc.edu/Research/cmmnde/plastics/plasticsframes.htm)
Nuclear Magnetic Resonance and Mass Spectrometry:
NMR facilities include 300, 400 MHz Varian Mercury, 400 Bruker
Avance/DRX, and 500 Varian Inova fully multinuclear NMR with
capabilities for solid state analysis. MS facilities include Finnigan
4500 with electron impact ionization, Finnigan TSQ with electron
capture negative ionization, VG 70S with electrospray ionization and
fast atom bombardment source, Micromass QTOF with atmospheric pressure
chemical ionization, and Bruker time-of-flight Ultraflex Maldi.
(http://www.chem.sc.edu/graduate/facilities_magnetic.asp)
(http://www.chem.sc.edu/graduate/facilities_mass.asp)
Electron Microscopy:
ES facilities include Philips ESEM equipped with hot and cold stages,
FEI Quanta ESEM equipped with EDAX, JOEL 100CX TEM, atomic resolution
STEM with x-ray microanalysis system, Delta Integrated SEM, and Bio-Rad
MRC 1024 multi-photon confocal microscope. A Bruker Smart Apex Single
Crystal x-ray diffractometer is available for determination of crystal
structure and percent crystallinity of polymers. (http://www.emc.sc.edu/)
Materials Surface Characterization:
Facilities include High-Resolution FTIR, laser Raman imaging, circular
dichroism, Ellipsometers, spectroscopic Ellipsometer, Omicron UHV
Scanning tunneling microscope (STM), and single molecule fluorescence
spectroscopy. (http://www.chem.sc.edu/graduate/facilities_materials.asp)
Instrumentation Resources Facilities:
They are located in the Department of Cell, Developmental and Anatomy
(CDBA) of the School of Medicine which include Integrated Microspcopic
Analysis (IMA), Core Tissue Culture, Histology, Darkroom, and
Microinjection facilities. Major equipment in IMA include a Zeiss LSM
510 META confocal microscope, Biorad MRC1024 confocal scanning laser
microscope, Zeiss Axiovert 135 ATTOFLOUR/CARV live cell imaging system,
JEOL 6300V SEM, JEOL 200CX TEM, Beckman Coulter EPICS XL flow
cytometer, Biorad FX phosphorimager, Nikon OPTIPHOT system, Ziess
Microm 505HN cryostat, and Citadel 1000 tissue processor, Bio-Rad
iCycler real time PCR, and PACE/MDQ capillary electrophoresis. Core
Tissue Culture facility is equipped with multiple laminar flow hoods
and tissue culture incubators, water purification system, AMSCO tissue
culture sterilizer, shaker water baths for cell isolation, spinner
culture bioreactors, rotators for suspension cultures, and incubators
for whole mammalian embryo culture. A dedicated Zeiss Axiovert 35
equipped with modulation optics, Zeiss micromanipulators, Eppendorf
5242 microinjector, a Sutter P-87 programmable pipette puller, and a
Narishige EG-4 pipet microgrinder is available in the Microinjection
Facility. (http://dba.med.sc.edu/price/irf/irf.htm)
Animal Resources:
Animals used for cell isolation and in vivo implantation are housed in
the AAALAC approved Animal Care Facility operated by the University of
South Carolina. The animal facility has a full time veterinarian. There
are multiple 200 ft2 spaces allocated for cell isolation or operation
on small and large animals. (http://uscm.med.sc.edu/ARF/index.htm)
Statistics:
Our laboratory has the capability to perform many of the statistical
procedures required for the analysis of data through the use of JMP,
Statview or Systat statistical programs. In addition, within the USC
campus, the PI has immediate access to the Statistics Laboratory in the
College of Nursing to use mainframe or PC based SAS (Statistical
Analysis System) and DBMS (Data Based Management System) programs. The
Statistics Laboratory can also provide consultation on sampling
techniques, multivariate analysis of the experimental data,
experimental design, and developing linear and nonlinear models for
data representation. (http://www.sc.edu/nursing/stat/statindex.html)